Sobic.001G132300.1

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0002244 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002244_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G132300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G132300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_47
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_35

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002182	NB-ARC	Pfam	215	421
IPR032675	LRR_dom_sf	Gene3D	559	865
IPR027417	P-loop_NTPase	Gene3D	172	350
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	618	641
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	665	687
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	595	617
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	923	946
IPR032675	LRR_dom_sf	Gene3D	886	1049
IPR044974	Disease_R_plants	PANTHER	1	1072
IPR038005	RX-like_CC	CDD	3	143
IPR041118	Rx_N	Pfam	5	95
IPR042197	Apaf_helical	Gene3D	354	439
IPR036388	WH-like_DNA-bd_sf	Gene3D	440	529
IPR027417	P-loop_NTPase	SUPERFAMILY	193	455

No CAZYmes available for this sequence

External Links

No external refs found!