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Description : ankyrin repeat family protein
Gene families : OG_01_0020516 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020516_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G137400.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G137400.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_86 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002110 | Ankyrin_rpt | Pfam | 218 | 290 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 98 | 130 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 235 | 267 |
| IPR002110 | Ankyrin_rpt | SMART | 63 | 93 |
| IPR002110 | Ankyrin_rpt | SMART | 131 | 160 |
| IPR002110 | Ankyrin_rpt | SMART | 235 | 264 |
| IPR002110 | Ankyrin_rpt | SMART | 196 | 233 |
| IPR002110 | Ankyrin_rpt | SMART | 163 | 192 |
| IPR002110 | Ankyrin_rpt | SMART | 98 | 127 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 436 | 469 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 164 | 343 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 23 | 163 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 368 | 479 |
| IPR002110 | Ankyrin_rpt | Pfam | 100 | 152 |
| IPR002110 | Ankyrin_rpt | PRINTS | 132 | 147 |
| IPR002110 | Ankyrin_rpt | PRINTS | 220 | 234 |
| IPR019734 | TPR_repeat | SMART | 436 | 469 |
| IPR019734 | TPR_repeat | SMART | 368 | 401 |
| IPR019734 | TPR_repeat | SMART | 402 | 435 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 163 | 195 |
| IPR002110 | Ankyrin_rpt | Pfam | 166 | 193 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 366 | 480 |
| IPR019734 | TPR_repeat | Pfam | 437 | 469 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 30 | 290 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 131 | 163 |
No CAZYmes available for this sequence
| No external refs found! |