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  5. Sobic.001G142100.1

Sobic.001G142100.1


Description : GTP binding protein beta 1


Gene families : OG_01_0012483 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012483_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G142100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G142100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_72
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_203


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0007165 signal transduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 9 372
IPR001680 WD40_rpt ProSiteProfiles 153 195
IPR001632 Gprotein_B PRINTS 81 95
IPR001632 Gprotein_B PRINTS 118 135
IPR001632 Gprotein_B PRINTS 100 115
IPR001632 Gprotein_B PRINTS 62 78
IPR019775 WD40_repeat_CS ProSitePatterns 173 187
IPR001680 WD40_rpt ProSiteProfiles 62 103
IPR001680 WD40_rpt Pfam 301 326
IPR001680 WD40_rpt Pfam 242 277
IPR001680 WD40_rpt Pfam 342 371
IPR001680 WD40_rpt Pfam 58 94
IPR001680 WD40_rpt Pfam 151 186
IPR001680 WD40_rpt Pfam 202 234
IPR001680 WD40_rpt ProSiteProfiles 201 243
IPR001680 WD40_rpt SMART 280 326
IPR001680 WD40_rpt SMART 146 186
IPR001680 WD40_rpt SMART 332 372
IPR001680 WD40_rpt SMART 55 94
IPR001680 WD40_rpt SMART 97 136
IPR001680 WD40_rpt SMART 189 234
IPR001680 WD40_rpt SMART 238 277
IPR001680 WD40_rpt ProSiteProfiles 245 286
IPR020472 G-protein_beta_WD-40_rep PRINTS 221 235
IPR020472 G-protein_beta_WD-40_rep PRINTS 81 95
IPR020472 G-protein_beta_WD-40_rep PRINTS 173 187
IPR001680 WD40_rpt ProSiteProfiles 340 380
IPR016346 Guanine_nucleotide-bd_bsu PANTHER 3 376
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 52 371

No CAZYmes available for this sequence

No external refs found!