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  5. Sobic.001G143700.1

Sobic.001G143700.1


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0003540 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003540_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G143700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G143700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_1
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93


Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006045 Cupin_1 Pfam 214 356
IPR006045 Cupin_1 Pfam 17 172
IPR014710 RmlC-like_jellyroll Gene3D 213 375
IPR006044 11S_seedstore_pln PRINTS 276 292
IPR006044 11S_seedstore_pln PRINTS 334 351
IPR006044 11S_seedstore_pln PRINTS 229 249
IPR006044 11S_seedstore_pln PRINTS 312 330
IPR006044 11S_seedstore_pln PRINTS 294 309
IPR011051 RmlC_Cupin_sf SUPERFAMILY 12 361
IPR006045 Cupin_1 SMART 13 175
IPR006045 Cupin_1 SMART 213 357
IPR014710 RmlC-like_jellyroll Gene3D 18 195

No CAZYmes available for this sequence

No external refs found!