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  5. Sobic.001G145600.1

Sobic.001G145600.1


Description : osmotin 34


Gene families : OG_01_0038970 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0038970_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G145600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G145600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_136


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 26 224
IPR001938 Thaumatin PANTHER 1 224
IPR001938 Thaumatin PIRSF 2 224
IPR001938 Thaumatin SMART 26 224
IPR001938 Thaumatin Pfam 30 224
IPR037176 Osmotin/thaumatin-like_sf Gene3D 24 224
IPR001938 Thaumatin PRINTS 80 109
IPR001938 Thaumatin PRINTS 116 132
IPR001938 Thaumatin PRINTS 44 53
IPR001938 Thaumatin PRINTS 25 37
IPR001938 Thaumatin PRINTS 214 223
IPR001938 Thaumatin ProSiteProfiles 23 224
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 225 2.8e-42 30 224
No external refs found!