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  5. Sobic.001G155700.5

Sobic.001G155700.5


Description : expansin B2


Gene families : OG_01_0006010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G155700.5
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G155700.5
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_194
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_112


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005795 LolPI PRINTS 93 103
IPR005795 LolPI PRINTS 223 240
IPR005795 LolPI PRINTS 73 84
IPR005795 LolPI PRINTS 243 260
IPR036749 Expansin_CBD_sf SUPERFAMILY 175 266
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 53 173
IPR036908 RlpA-like_sf SUPERFAMILY 34 193
IPR007118 Expan_Lol_pI PRINTS 253 267
IPR007118 Expan_Lol_pI PRINTS 34 49
IPR007118 Expan_Lol_pI PRINTS 52 70
IPR007118 Expan_Lol_pI PRINTS 75 93
IPR007118 Expan_Lol_pI PRINTS 156 172
IPR007118 Expan_Lol_pI PRINTS 214 228
IPR007117 Expansin_CBD Pfam 175 256
IPR036908 RlpA-like_sf Gene3D 22 169
IPR009009 RlpA-like_DPBB Pfam 72 163
IPR007112 Expansin/allergen_DPBB_dom SMART 71 163
IPR036749 Expansin_CBD_sf Gene3D 173 268
IPR007117 Expansin_CBD ProSiteProfiles 186 267

No CAZYmes available for this sequence

No external refs found!