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  5. Sobic.001G156100.1

Sobic.001G156100.1


Description : ornithine-delta-aminotransferase


Gene families : OG_01_0012754 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012754_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G156100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G156100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_201
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_164


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004587 ornithine aminotransferase activity ISM GOs from InterProScan
MF GO:0008483 transaminase activity ISM GOs from InterProScan
MF GO:0030170 pyridoxal phosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005814 Aminotrans_3 Pfam 45 437
IPR015422 PyrdxlP-dep_Trfase_small Gene3D 41 429
IPR005814 Aminotrans_3 CDD 37 437
IPR010164 Orn_aminotrans TIGRFAM 34 437
IPR005814 Aminotrans_3 PIRSF 20 189
IPR005814 Aminotrans_3 PIRSF 202 440
IPR010164 Orn_aminotrans PANTHER 34 438
IPR005814 Aminotrans_3 ProSitePatterns 256 293
IPR015421 PyrdxlP-dep_Trfase_major Gene3D 88 340
IPR015424 PyrdxlP-dep_Trfase SUPERFAMILY 46 438

No CAZYmes available for this sequence

No external refs found!