Sobic.001G161700.1

Description : AAA-type ATPase family protein

Gene families : OG_01_0005719 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005719_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G161700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G161700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_226

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0035494	SNARE complex disassembly	ISM	GOs from InterProScan
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	SUPERFAMILY	494	741
IPR027417	P-loop_NTPase	Gene3D	494	665
IPR003593	AAA+_ATPase	SMART	252	399
IPR003593	AAA+_ATPase	SMART	532	670
IPR039812	Vesicle-fus_ATPase	PANTHER	13	743
IPR003338	CDC4_N-term_subdom	SMART	18	97
IPR041569	AAA_lid_3	Pfam	423	478
IPR003959	ATPase_AAA_core	Pfam	256	396
IPR003959	ATPase_AAA_core	Pfam	537	647
IPR029067	CDC48_domain_2-like_sf	SUPERFAMILY	97	201
IPR027417	P-loop_NTPase	SUPERFAMILY	229	495
IPR003960	ATPase_AAA_CS	ProSitePatterns	367	385
IPR027417	P-loop_NTPase	Gene3D	207	397
IPR009010	Asp_de-COase-like_dom_sf	SUPERFAMILY	18	97
IPR004201	Cdc48_dom2	Pfam	123	160

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G161700.1

Expression Profile

Co-expression Networks

Functional Annotation