Sobic.001G165401.1

Description : AP2/B3-like transcriptional factor family protein

Gene families : OG_01_0003619 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003619_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G165401.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G165401.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_57

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003340	B3_DNA-bd	SMART	33	123
IPR003340	B3_DNA-bd	SMART	237	337
IPR003340	B3_DNA-bd	ProSiteProfiles	276	337
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	31	130
IPR003340	B3_DNA-bd	CDD	31	121
IPR003340	B3_DNA-bd	CDD	235	335
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	232	335
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	216	337
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	24	125
IPR003340	B3_DNA-bd	Pfam	41	121
IPR003340	B3_DNA-bd	Pfam	273	336
IPR003340	B3_DNA-bd	ProSiteProfiles	30	123

No CAZYmes available for this sequence

External Links

No external refs found!