Sobic.001G165500.2

Description : AP2/B3-like transcriptional factor family protein

Gene families : OG_01_0026406 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0026406_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G165500.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G165500.2	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	23	121
IPR003340	B3_DNA-bd	Pfam	30	117
IPR003340	B3_DNA-bd	Pfam	252	337
IPR003340	B3_DNA-bd	Pfam	468	553
IPR003340	B3_DNA-bd	CDD	456	552
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	435	554
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	215	340
IPR003340	B3_DNA-bd	ProSiteProfiles	460	554
IPR003340	B3_DNA-bd	CDD	30	117
IPR003340	B3_DNA-bd	CDD	237	336
IPR003340	B3_DNA-bd	ProSiteProfiles	238	339
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	451	552
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	231	329
IPR003340	B3_DNA-bd	SMART	237	339
IPR003340	B3_DNA-bd	SMART	458	554
IPR003340	B3_DNA-bd	SMART	29	119
IPR003340	B3_DNA-bd	ProSiteProfiles	26	119
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	23	121
IPR044837	REM16-like	PANTHER	248	553
IPR044837	REM16-like	PANTHER	3	192

No CAZYmes available for this sequence

External Links

No external refs found!