Sobic.001G166000.2

Description : AP2/B3-like transcriptional factor family protein

Gene families : OG_01_0011733 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011733_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G166000.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G166000.2	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003340	B3_DNA-bd	Pfam	264	340
IPR003340	B3_DNA-bd	Pfam	33	113
IPR003340	B3_DNA-bd	SMART	250	341
IPR003340	B3_DNA-bd	SMART	25	115
IPR003340	B3_DNA-bd	ProSiteProfiles	22	115
IPR044837	REM16-like	PANTHER	212	343
IPR003340	B3_DNA-bd	ProSiteProfiles	246	341
IPR003340	B3_DNA-bd	CDD	24	113
IPR044837	REM16-like	PANTHER	2	198
IPR003340	B3_DNA-bd	CDD	245	339
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	21	121
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	16	117
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	225	342
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	240	339

No CAZYmes available for this sequence

External Links

No external refs found!