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Description : AP2/B3-like transcriptional factor family protein
Gene families : OG_01_0003711 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003711_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G166900.3 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G166900.3 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_139 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_1 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 427 | 525 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 659 | 718 |
| IPR044837 | REM16-like | PANTHER | 379 | 541 |
| IPR044837 | REM16-like | PANTHER | 3 | 373 |
| IPR044837 | REM16-like | PANTHER | 558 | 721 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 603 | 721 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 217 | 340 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 404 | 524 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 420 | 523 |
| IPR003340 | B3_DNA-bd | CDD | 424 | 520 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 30 | 123 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 29 | 129 |
| IPR003340 | B3_DNA-bd | SMART | 239 | 339 |
| IPR003340 | B3_DNA-bd | SMART | 426 | 525 |
| IPR003340 | B3_DNA-bd | SMART | 33 | 123 |
| IPR003340 | B3_DNA-bd | SMART | 625 | 718 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 621 | 719 |
| IPR003340 | B3_DNA-bd | CDD | 31 | 121 |
| IPR003340 | B3_DNA-bd | CDD | 624 | 716 |
| IPR003340 | B3_DNA-bd | Pfam | 429 | 521 |
| IPR003340 | B3_DNA-bd | Pfam | 34 | 121 |
| IPR003340 | B3_DNA-bd | Pfam | 656 | 717 |
| IPR003340 | B3_DNA-bd | Pfam | 254 | 336 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 234 | 331 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 240 | 339 |
| IPR003340 | B3_DNA-bd | CDD | 239 | 336 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 24 | 125 |
No CAZYmes available for this sequence
| No external refs found! |