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  5. Sobic.001G167701.1

Sobic.001G167701.1


Description : Leucine-rich repeat transmembrane protein kinase


Gene families : OG_01_0015116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015116_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G167701.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G167701.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_80
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_145


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001611 Leu-rich_rpt Pfam 482 501
IPR001611 Leu-rich_rpt Pfam 507 528
IPR025875 Leu-rich_rpt_4 Pfam 187 226
IPR001611 Leu-rich_rpt Pfam 297 356
IPR032675 LRR_dom_sf Gene3D 179 225
IPR003591 Leu-rich_rpt_typical-subtyp SMART 393 416
IPR003591 Leu-rich_rpt_typical-subtyp SMART 162 185
IPR003591 Leu-rich_rpt_typical-subtyp SMART 210 233
IPR003591 Leu-rich_rpt_typical-subtyp SMART 186 209
IPR003591 Leu-rich_rpt_typical-subtyp SMART 480 504
IPR013210 LRR_N_plant-typ Pfam 27 63
IPR032675 LRR_dom_sf Gene3D 226 281
IPR032675 LRR_dom_sf Gene3D 282 581
IPR032675 LRR_dom_sf Gene3D 24 178

No CAZYmes available for this sequence

No external refs found!