1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G170100.1

Sobic.001G170100.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005178 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005178_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G170100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G170100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 39 348
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 34 291
IPR045160 ATG16 PANTHER 11 1656
IPR011048 Haem_d1_sf SUPERFAMILY 223 603
IPR001680 WD40_rpt SMART 161 197
IPR001680 WD40_rpt SMART 250 289
IPR001680 WD40_rpt SMART 210 245
IPR001680 WD40_rpt SMART 64 103
IPR001680 WD40_rpt ProSiteProfiles 257 291

No CAZYmes available for this sequence

No external refs found!