1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G200200.1

Sobic.001G200200.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0001286 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001286_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G200200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G200200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_238


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 63 754
IPR019734 TPR_repeat SMART 688 721
IPR019734 TPR_repeat SMART 140 173
IPR019734 TPR_repeat SMART 63 96
IPR019734 TPR_repeat SMART 106 139
IPR011990 TPR-like_helical_dom_sf Gene3D 40 204
IPR001214 SET_dom ProSiteProfiles 215 518
IPR011990 TPR-like_helical_dom_sf Gene3D 525 784
IPR001214 SET_dom Pfam 228 518

No CAZYmes available for this sequence

No external refs found!