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  5. Sobic.001G203500.1

Sobic.001G203500.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014571 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014571_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G203500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G203500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_198


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 259 436
IPR011990 TPR-like_helical_dom_sf Gene3D 77 258
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 319 418
IPR002885 Pentatricopeptide_rpt Pfam 358 384
IPR002885 Pentatricopeptide_rpt Pfam 146 174
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 177 211
IPR002885 Pentatricopeptide_rpt Pfam 177 223
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 353 387
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 144 473
IPR002885 Pentatricopeptide_rpt TIGRFAM 179 213
IPR002885 Pentatricopeptide_rpt TIGRFAM 357 385

No CAZYmes available for this sequence

No external refs found!