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  5. Sobic.001G208500.1

Sobic.001G208500.1


Description : beta-tonoplast intrinsic protein


Gene families : OG_01_0017052 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017052_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G208500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G208500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_19


Type GO Term Name Evidence Source
MF GO:0015267 channel activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023271 Aquaporin-like SUPERFAMILY 19 252
IPR000425 MIP CDD 26 243
IPR023271 Aquaporin-like Gene3D 9 252
IPR034294 Aquaporin_transptr PANTHER 8 266
IPR000425 MIP TIGRFAM 30 240
IPR000425 MIP Pfam 20 240
IPR022357 MIP_CS ProSitePatterns 89 97
IPR000425 MIP PRINTS 71 95
IPR000425 MIP PRINTS 26 45
IPR000425 MIP PRINTS 186 208
IPR000425 MIP PRINTS 153 171
IPR000425 MIP PRINTS 223 243
IPR000425 MIP PRINTS 108 127

No CAZYmes available for this sequence

No external refs found!