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  5. Sobic.001G214200.1

Sobic.001G214200.1


Description : Peptidoglycan-binding LysM domain-containing protein


Gene families : OG_01_0007344 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007344_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G214200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G214200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018392 LysM_dom SMART 68 112
IPR036779 LysM_dom_sf Gene3D 51 125
IPR018392 LysM_dom Pfam 69 112
IPR018392 LysM_dom CDD 69 111
IPR018392 LysM_dom ProSiteProfiles 67 111
IPR036779 LysM_dom_sf SUPERFAMILY 67 112
IPR045030 LYSM1-4 PANTHER 1 360
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM50 40 361 7e-06 69 112
No external refs found!