1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G214900.1

Sobic.001G214900.1


Description : pentatricopeptide repeat 336


Gene families : OG_01_0012212 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012212_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G214900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G214900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_179
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_95


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 304 338
IPR002885 Pentatricopeptide_rpt TIGRFAM 271 304
IPR002885 Pentatricopeptide_rpt TIGRFAM 307 333
IPR002885 Pentatricopeptide_rpt TIGRFAM 198 227
IPR011990 TPR-like_helical_dom_sf Gene3D 109 417
IPR002885 Pentatricopeptide_rpt Pfam 268 317
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 269 303
IPR002885 Pentatricopeptide_rpt Pfam 198 225

No CAZYmes available for this sequence

No external refs found!