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  5. Sobic.001G227900.1

Sobic.001G227900.1


Description : response regulator 1


Gene families : OG_01_0039862 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0039862_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G227900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G227900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_73
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_29


Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
BP GO:0009736 cytokinin-activated signaling pathway ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017930 Myb_dom ProSiteProfiles 192 250
IPR001789 Sig_transdc_resp-reg_receiver Pfam 12 120
IPR045279 ARR-like PANTHER 1 345
IPR006447 Myb_dom_plants TIGRFAM 195 248
IPR001789 Sig_transdc_resp-reg_receiver SMART 10 122
IPR009057 Homeobox-like_sf SUPERFAMILY 193 251
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 11 126
IPR011006 CheY-like_superfamily SUPERFAMILY 8 144
IPR017930 Myb_dom Pfam 198 246

No CAZYmes available for this sequence

No external refs found!