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  5. Sobic.001G246200.1

Sobic.001G246200.1


Description : BTB-POZ and MATH domain 1


Gene families : OG_01_0013471 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013471_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G246200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G246200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_141


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 175 304
IPR045005 BPM1-6 PANTHER 13 270
IPR002083 MATH/TRAF_dom CDD 32 161
IPR045005 BPM1-6 PANTHER 278 364
IPR000210 BTB/POZ_dom SMART 198 304
IPR000210 BTB/POZ_dom Pfam 191 303
IPR011333 SKP1/BTB/POZ_sf Gene3D 174 299
IPR002083 MATH/TRAF_dom Pfam 41 158
IPR008974 TRAF-like Gene3D 32 164
IPR002083 MATH/TRAF_dom ProSiteProfiles 31 161
IPR000210 BTB/POZ_dom ProSiteProfiles 198 267

No CAZYmes available for this sequence

No external refs found!