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  5. Sobic.001G248100.1

Sobic.001G248100.1


Description : histone acetyltransferase of the GNAT family 1


Gene families : OG_01_0007191 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007191_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G248100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G248100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_325
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_128


Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008080 N-acetyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000182 GNAT_dom ProSiteProfiles 172 319
IPR001487 Bromodomain PRINTS 471 490
IPR001487 Bromodomain PRINTS 436 452
IPR001487 Bromodomain PRINTS 422 435
IPR001487 Bromodomain PRINTS 453 471
IPR001487 Bromodomain ProSiteProfiles 419 490
IPR016181 Acyl_CoA_acyltransferase SUPERFAMILY 185 320
IPR036427 Bromodomain-like_sf Gene3D 390 514
IPR037800 GCN5 PANTHER 6 511
IPR000182 GNAT_dom Pfam 213 290
IPR001487 Bromodomain SMART 400 509
IPR018359 Bromodomain_CS ProSitePatterns 424 482
IPR036427 Bromodomain-like_sf SUPERFAMILY 390 508
IPR001487 Bromodomain Pfam 411 494

No CAZYmes available for this sequence

No external refs found!