Sobic.001G249400.1

Description : Tetrapyrrole (Corrin/Porphyrin) Methylases

Gene families : OG_01_0006491 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006491_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G249400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G249400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_139
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008189	rRNA_ssu_MeTfrase_I	Hamap	61	280
IPR008189	rRNA_ssu_MeTfrase_I	TIGRFAM	62	331
IPR008189	rRNA_ssu_MeTfrase_I	PIRSF	51	336
IPR000878	4pyrrol_Mease	Pfam	62	261
IPR014777	4pyrrole_Mease_sub1	Gene3D	57	169
IPR018063	SAM_MeTrfase_RsmI_CS	ProSitePatterns	139	150
IPR035996	4pyrrol_Methylase_sf	SUPERFAMILY	61	278
IPR008189	rRNA_ssu_MeTfrase_I	PANTHER	50	335
IPR008189	rRNA_ssu_MeTfrase_I	CDD	63	279
IPR014776	4pyrrole_Mease_sub2	Gene3D	170	283

No CAZYmes available for this sequence

External Links

No external refs found!