Sobic.001G257800.1

Description : myosin, putative

Gene families : OG_01_0008409 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008409_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G257800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G257800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_6
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007015	actin filament organization	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016459	myosin complex	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	SUPERFAMILY	39	783
IPR002710	Dilute_dom	ProSiteProfiles	1146	1444
IPR002710	Dilute_dom	Pfam	1321	1423
IPR001609	Myosin_head_motor_dom	ProSiteProfiles	63	733
IPR001609	Myosin_head_motor_dom	Pfam	65	721
IPR001609	Myosin_head_motor_dom	PRINTS	93	112
IPR001609	Myosin_head_motor_dom	PRINTS	197	224
IPR001609	Myosin_head_motor_dom	PRINTS	429	457
IPR001609	Myosin_head_motor_dom	PRINTS	150	175
IPR001609	Myosin_head_motor_dom	PRINTS	482	510
IPR037975	MyosinXI_CBD	CDD	1097	1467
IPR036961	Kinesin_motor_dom_sf	Gene3D	66	663
IPR027417	P-loop_NTPase	SUPERFAMILY	782	884
IPR001609	Myosin_head_motor_dom	SMART	57	734
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	759	788
IPR002710	Dilute_dom	SMART	1320	1426
IPR000048	IQ_motif_EF-hand-BS	SMART	831	852
IPR000048	IQ_motif_EF-hand-BS	SMART	758	780
IPR000048	IQ_motif_EF-hand-BS	SMART	735	757
IPR000048	IQ_motif_EF-hand-BS	SMART	806	828
IPR000048	IQ_motif_EF-hand-BS	SMART	854	876
IPR000048	IQ_motif_EF-hand-BS	SMART	783	805
IPR036018	MYSc_Myo11	CDD	77	721

No CAZYmes available for this sequence

External Links

No external refs found!