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  5. Sobic.001G260800.1

Sobic.001G260800.1


Description : alanine aminotransferase 2


Gene families : OG_01_0000100 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000100_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G260800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G260800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_2


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0008483 transaminase activity ISM GOs from InterProScan
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0030170 pyridoxal phosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004839 Aminotransferase_I/II Pfam 117 467
IPR015422 PyrdxlP-dep_Trfase_small Gene3D 10 492
IPR045088 ALAT1/2-like PANTHER 4 493
IPR015424 PyrdxlP-dep_Trfase SUPERFAMILY 107 484
IPR015421 PyrdxlP-dep_Trfase_major Gene3D 122 368

No CAZYmes available for this sequence

No external refs found!