Sobic.001G281500.1

Description : CLP protease P4

Gene families : OG_01_0014883 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014883_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G281500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G281500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_161

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	ISM	GOs from InterProScan
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001907	ClpP	CDD	76	246
IPR023562	ClpP/TepA	Pfam	74	248
IPR033135	ClpP_His_AS	ProSitePatterns	169	182
IPR023562	ClpP/TepA	PANTHER	13	286
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	75	251
IPR001907	ClpP	PRINTS	116	136
IPR001907	ClpP	PRINTS	225	244
IPR001907	ClpP	PRINTS	76	91
IPR001907	ClpP	PRINTS	147	164
IPR001907	ClpP	PRINTS	168	187
IPR001907	ClpP	Hamap	54	250

No CAZYmes available for this sequence

External Links

No external refs found!