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Description : expansin B2
Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G300400.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G300400.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_21 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_91 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | GOs from InterProScan |
| BP | GO:0019953 | sexual reproduction | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR007112 | Expansin/allergen_DPBB_dom | ProSiteProfiles | 79 | 185 |
| IPR036749 | Expansin_CBD_sf | Gene3D | 184 | 288 |
| IPR036908 | RlpA-like_sf | Gene3D | 42 | 181 |
| IPR007117 | Expansin_CBD | Pfam | 187 | 274 |
| IPR005795 | LolPI | PRINTS | 118 | 128 |
| IPR005795 | LolPI | PRINTS | 135 | 150 |
| IPR005795 | LolPI | PRINTS | 157 | 172 |
| IPR005795 | LolPI | PRINTS | 189 | 204 |
| IPR005795 | LolPI | PRINTS | 261 | 278 |
| IPR005795 | LolPI | PRINTS | 241 | 258 |
| IPR005795 | LolPI | PRINTS | 98 | 109 |
| IPR005795 | LolPI | PRINTS | 205 | 220 |
| IPR009009 | RlpA-like_DPBB | Pfam | 97 | 174 |
| IPR036749 | Expansin_CBD_sf | SUPERFAMILY | 186 | 285 |
| IPR007117 | Expansin_CBD | ProSiteProfiles | 198 | 285 |
| IPR036908 | RlpA-like_sf | SUPERFAMILY | 52 | 184 |
| IPR007118 | Expan_Lol_pI | PRINTS | 271 | 285 |
| IPR007118 | Expan_Lol_pI | PRINTS | 58 | 73 |
| IPR007118 | Expan_Lol_pI | PRINTS | 100 | 118 |
| IPR007118 | Expan_Lol_pI | PRINTS | 232 | 246 |
| IPR007118 | Expan_Lol_pI | PRINTS | 78 | 96 |
| IPR007118 | Expan_Lol_pI | PRINTS | 168 | 184 |
| IPR007112 | Expansin/allergen_DPBB_dom | SMART | 96 | 175 |
No CAZYmes available for this sequence
| No external refs found! |