Sobic.001G301700.2

Description : DnaJ domain ;Myb-like DNA-binding domain

Gene families : OG_01_0003814 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003814_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G301700.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G301700.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_46
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_16

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006450	regulation of translational fidelity	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	None	Extended
BP	GO:0006458	'de novo' protein folding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030544	Hsp70 protein binding	ISM	GOs from InterProScan
MF	GO:0031072	heat shock protein binding	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	ISM	GOs from InterProScan
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0051083	'de novo' cotranslational protein folding	ISM	GOs from InterProScan
MF	GO:0051087	protein-folding chaperone binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001005	SANT/Myb	CDD	471	511
IPR001623	DnaJ_domain	ProSiteProfiles	97	179
IPR044634	Zuotin/DnaJC2	PANTHER	1	651
IPR001623	DnaJ_domain	SMART	96	171
IPR018253	DnaJ_domain_CS	ProSitePatterns	156	175
IPR001005	SANT/Myb	ProSiteProfiles	464	519
IPR001005	SANT/Myb	SMART	468	521
IPR001005	SANT/Myb	SMART	594	646
IPR009057	Homeobox-like_sf	SUPERFAMILY	596	647
IPR001005	SANT/Myb	ProSiteProfiles	598	639
IPR001623	DnaJ_domain	Pfam	97	176
IPR001623	DnaJ_domain	CDD	97	168
IPR001005	SANT/Myb	CDD	597	639
IPR036869	J_dom_sf	Gene3D	78	189
IPR001623	DnaJ_domain	PRINTS	102	120
IPR001623	DnaJ_domain	PRINTS	120	135
IPR001623	DnaJ_domain	PRINTS	151	171
IPR009057	Homeobox-like_sf	SUPERFAMILY	466	513
IPR036869	J_dom_sf	SUPERFAMILY	80	175

No CAZYmes available for this sequence

External Links

No external refs found!