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Description : XB3 ortholog 3 in Arabidopsis thaliana
Gene families : OG_01_0002277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002277_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G322000.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G322000.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR017907 | Znf_RING_CS | ProSitePatterns | 342 | 351 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 311 | 392 |
| IPR002110 | Ankyrin_rpt | Pfam | 229 | 254 |
| IPR002110 | Ankyrin_rpt | Pfam | 186 | 216 |
| IPR002110 | Ankyrin_rpt | SMART | 185 | 214 |
| IPR002110 | Ankyrin_rpt | SMART | 111 | 141 |
| IPR002110 | Ankyrin_rpt | SMART | 44 | 73 |
| IPR002110 | Ankyrin_rpt | SMART | 77 | 106 |
| IPR002110 | Ankyrin_rpt | SMART | 228 | 260 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 44 | 76 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 111 | 132 |
| IPR001841 | Znf_RING | SMART | 327 | 376 |
| IPR002110 | Ankyrin_rpt | PRINTS | 45 | 60 |
| IPR002110 | Ankyrin_rpt | PRINTS | 201 | 215 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 77 | 109 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 185 | 217 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 154 | 282 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 14 | 282 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 228 | 254 |
| IPR001841 | Znf_RING | ProSiteProfiles | 327 | 377 |
| IPR002110 | Ankyrin_rpt | Pfam | 46 | 98 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 8 | 149 |
No CAZYmes available for this sequence
| No external refs found! |