1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G322500.2

Sobic.001G322500.2


Description : trehalase 1


Gene families : OG_01_0005077 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005077_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G322500.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G322500.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_334
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32


Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0005991 trehalose metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001661 Glyco_hydro_37 Pfam 1 381
IPR012341 6hp_glycosidase-like_sf Gene3D 1 391
IPR008928 6-hairpin_glycosidase_sf SUPERFAMILY 1 383
IPR018232 Glyco_hydro_37_CS ProSitePatterns 291 300
IPR001661 Glyco_hydro_37 PANTHER 1 393
IPR001661 Glyco_hydro_37 PRINTS 89 106
IPR001661 Glyco_hydro_37 PRINTS 284 300
IPR001661 Glyco_hydro_37 PRINTS 19 37
IPR001661 Glyco_hydro_37 PRINTS 124 141
IPR001661 Glyco_hydro_37 PRINTS 156 173
IPR001661 Glyco_hydro_37 PRINTS 364 377
HMM Family HMM Length Query Length e-Value Query Start Query End
GH37 491 399 2.7e-132 1 379
No external refs found!