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  5. Sobic.001G326300.1

Sobic.001G326300.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003038 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003038_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G326300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G326300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_74


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0009658 chloroplast organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 488 532
IPR044645 DG1/EMB2279-like PANTHER 25 863
IPR011990 TPR-like_helical_dom_sf Gene3D 443 550
IPR011990 TPR-like_helical_dom_sf Gene3D 202 334
IPR011990 TPR-like_helical_dom_sf Gene3D 335 439
IPR033443 PPR_long Pfam 349 448
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 345 379
IPR002885 Pentatricopeptide_rpt Pfam 262 288
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 380 414
IPR011990 TPR-like_helical_dom_sf Gene3D 555 721
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 415 449

No CAZYmes available for this sequence

No external refs found!