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  5. Sevir.8G079000.1

Sevir.8G079000.1


Description : Trypsin family protein with PDZ domain


Gene families : OG_01_0005742 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005742_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G079000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G079000.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108


Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041489 PDZ_6 Pfam 362 411
IPR001940 Peptidase_S1C PRINTS 283 300
IPR001940 Peptidase_S1C PRINTS 223 247
IPR001940 Peptidase_S1C PRINTS 372 384
IPR001940 Peptidase_S1C PRINTS 261 278
IPR001940 Peptidase_S1C PRINTS 153 165
IPR009003 Peptidase_S1_PA SUPERFAMILY 110 335
IPR036034 PDZ_sf Gene3D 323 424
IPR001478 PDZ ProSiteProfiles 310 390
IPR036034 PDZ_sf SUPERFAMILY 325 424
IPR001478 PDZ SMART 326 413

No CAZYmes available for this sequence

No external refs found!