Sobic.001G350400.3

Description : transthyretin-like protein

Gene families : OG_01_0002672 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002672_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G350400.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G350400.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_323
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006144	purine nucleobase metabolic process	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009112	nucleobase metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	None	Extended
MF	GO:0033971	hydroxyisourate hydrolase activity	ISM	GOs from InterProScan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023418	Thyroxine_BS	ProSitePatterns	216	231
IPR036778	OHCU_decarboxylase_sf	SUPERFAMILY	15	157
IPR023416	Transthyretin/HIU_hydrolase_d	Pfam	213	331
IPR000895	Transthyretin/HIU_hydrolase	PRINTS	212	232
IPR000895	Transthyretin/HIU_hydrolase	PRINTS	310	332
IPR014306	Hydroxyisourate_hydrolase	CDD	211	332
IPR036817	Transthyretin/HIU_hydrolase_sf	Gene3D	202	330
IPR036817	Transthyretin/HIU_hydrolase_sf	SUPERFAMILY	206	332
IPR014306	Hydroxyisourate_hydrolase	TIGRFAM	212	332
IPR036778	OHCU_decarboxylase_sf	Gene3D	9	158
IPR023416	Transthyretin/HIU_hydrolase_d	PANTHER	7	332
IPR018020	OHCU_decarboxylase	Pfam	20	153

No CAZYmes available for this sequence

External Links

No external refs found!