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  5. Sobic.001G366300.1

Sobic.001G366300.1


Description : telomerase reverse transcriptase


Gene families : OG_01_0014253 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014253_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G366300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G366300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_276
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_80


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0003721 telomerase RNA reverse transcriptase activity ISM GOs from InterProScan
MF GO:0003964 RNA-directed DNA polymerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR021891 Telomerase_RBD Pfam 462 605
IPR003545 Telomerase_RT PANTHER 10 1129
IPR021891 Telomerase_RBD SMART 461 608
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 822 1023
IPR003545 Telomerase_RT PRINTS 866 878
IPR003545 Telomerase_RT PRINTS 575 589
IPR003545 Telomerase_RT PRINTS 702 718
IPR000477 RT_dom ProSiteProfiles 615 940

No CAZYmes available for this sequence

No external refs found!