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  5. Sobic.001G374000.1

Sobic.001G374000.1


Description : Cation efflux family protein


Gene families : OG_01_0002701 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002701_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G374000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G374000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_255
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32


Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 293 371
IPR036837 Cation_efflux_CTD_sf Gene3D 297 386
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 67 291
IPR027470 Cation_efflux_CTD Pfam 296 371
IPR002524 Cation_efflux Pfam 72 290
IPR027469 Cation_efflux_TMD_sf Gene3D 67 290
IPR002524 Cation_efflux TIGRFAM 68 372

No CAZYmes available for this sequence

No external refs found!