Sobic.001G386400.2

Description : aminophospholipid ATPase 1

Gene families : OG_01_0001291 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001291_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G386400.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G386400.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_173
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISM	GOs from InterProScan
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	ISM	GOs from InterProScan
MF	GO:0005319	lipid transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015748	organophosphate ester transport	None	Extended
BP	GO:0015914	phospholipid transport	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140303	intramembrane lipid transporter activity	None	Extended
MF	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	ISM	GOs from InterProScan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001757	P_typ_ATPase	TIGRFAM	774	829
IPR001757	P_typ_ATPase	TIGRFAM	895	1016
IPR023298	ATPase_P-typ_TM_dom_sf	SUPERFAMILY	150	1195
IPR023299	ATPase_P-typ_cyto_dom_N	SUPERFAMILY	525	792
IPR018303	ATPase_P-typ_P_site	ProSitePatterns	521	527
IPR032631	P-type_ATPase_N	Pfam	133	199
IPR023299	ATPase_P-typ_cyto_dom_N	Gene3D	615	756
IPR032630	P_typ_ATPase_c	Pfam	958	1198
IPR036412	HAD-like_sf	SUPERFAMILY	514	976
IPR023214	HAD_sf	Gene3D	776	970
IPR006539	P-type_ATPase_IV	TIGRFAM	149	1205
IPR008250	ATPase_P-typ_transduc_dom_A_sf	SUPERFAMILY	231	372
IPR044492	P_typ_ATPase_HD_dom	SFLD	502	981

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G386400.2

Expression Profile

Co-expression Networks

Functional Annotation