Sobic.001G393300.1

Description : haloacid dehalogenase-like hydrolase family protein

Gene families : OG_01_0003700 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003700_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G393300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G393300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_43
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000033	LDLR_classB_rpt	SMART	884	925
IPR000033	LDLR_classB_rpt	SMART	649	691
IPR000033	LDLR_classB_rpt	SMART	820	862
IPR006439	HAD-SF_hydro_IA	PRINTS	268	284
IPR006439	HAD-SF_hydro_IA	PRINTS	236	249
IPR006439	HAD-SF_hydro_IA	PRINTS	286	306
IPR006439	HAD-SF_hydro_IA	PRINTS	138	149
IPR001258	NHL_repeat	ProSiteProfiles	891	921
IPR045302	NHL2_NHL_rpt_dom	CDD	694	1034
IPR036412	HAD-like_sf	SUPERFAMILY	138	348
IPR023198	PGP-like_dom2	Gene3D	151	222
IPR006439	HAD-SF_hydro_IA	TIGRFAM	266	324
IPR012336	Thioredoxin-like_fold	Pfam	509	604
IPR036249	Thioredoxin-like_sf	SUPERFAMILY	485	621
IPR041492	HAD_2	Pfam	141	324
IPR023214	HAD_sf	Gene3D	140	329
IPR013766	Thioredoxin_domain	ProSiteProfiles	468	626
IPR001258	NHL_repeat	Pfam	891	917
IPR001258	NHL_repeat	Pfam	711	736
IPR011042	6-blade_b-propeller_TolB-like	Gene3D	641	798
IPR011042	6-blade_b-propeller_TolB-like	Gene3D	879	975

No CAZYmes available for this sequence

External Links

No external refs found!