Sobic.001G397000.1

Description : L-Aspartase-like family protein

Gene families : OG_01_0011821 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011821_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G397000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G397000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004056	argininosuccinate lyase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006525	arginine metabolic process	None	Extended
BP	GO:0006526	arginine biosynthetic process	None	Extended
BP	GO:0006591	ornithine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016840	carbon-nitrogen lyase activity	None	Extended
MF	GO:0016842	amidine-lyase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0042450	arginine biosynthetic process via ornithine	ISM	GOs from InterProScan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009049	Argininosuccinate_lyase	CDD	79	509
IPR009049	Argininosuccinate_lyase	TIGRFAM	60	511
IPR009049	Argininosuccinate_lyase	PANTHER	71	516
IPR009049	Argininosuccinate_lyase	Hamap	59	510
IPR024083	Fumarase/histidase_N	Gene3D	79	286
IPR022761	Fumarate_lyase_N	Pfam	63	357
IPR008948	L-Aspartase-like	SUPERFAMILY	60	510
IPR020557	Fumarate_lyase_CS	ProSitePatterns	332	341
IPR000362	Fumarate_lyase_fam	PRINTS	332	348
IPR000362	Fumarate_lyase_fam	PRINTS	204	222
IPR000362	Fumarate_lyase_fam	PRINTS	288	315
IPR000362	Fumarate_lyase_fam	PRINTS	159	177
IPR029419	Arg_succ_lyase_C	Pfam	420	488

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G397000.1

Expression Profile

Co-expression Networks

Functional Annotation