Sobic.001G397800.1

Description : transcription coactivators

Gene families : OG_01_0004442 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004442_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G397800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G397800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_129

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001357	BRCT_dom	SMART	1165	1246
IPR001357	BRCT_dom	SMART	1284	1371
IPR001357	BRCT_dom	SMART	15	93
IPR001357	BRCT_dom	SMART	106	189
IPR001357	BRCT_dom	Pfam	118	181
IPR036420	BRCT_dom_sf	Gene3D	1284	1384
IPR001965	Znf_PHD	SMART	1421	1473
IPR019787	Znf_PHD-finger	Pfam	1422	1473
IPR001357	BRCT_dom	Pfam	1182	1254
IPR036420	BRCT_dom_sf	SUPERFAMILY	1173	1256
IPR001357	BRCT_dom	ProSiteProfiles	1174	1256
IPR036420	BRCT_dom_sf	Gene3D	8	102
IPR036420	BRCT_dom_sf	Gene3D	1168	1283
IPR001357	BRCT_dom	ProSiteProfiles	117	199
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	1409	1485
IPR019787	Znf_PHD-finger	ProSiteProfiles	1419	1475
IPR013083	Znf_RING/FYVE/PHD	Gene3D	1385	1479
IPR036420	BRCT_dom_sf	SUPERFAMILY	17	98
IPR036420	BRCT_dom_sf	Gene3D	105	227
IPR044254	At4g02110-like	PANTHER	11	1472
IPR036420	BRCT_dom_sf	SUPERFAMILY	118	198
IPR001357	BRCT_dom	ProSiteProfiles	13	103

No CAZYmes available for this sequence

External Links

No external refs found!