Sobic.001G399200.1

Description : P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Gene families : OG_01_0002236 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002236_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G399200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G399200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_224
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	ISM	GOs from InterProScan
MF	GO:0008017	microtubule binding	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001715	CH_dom	SMART	43	162
IPR001752	Kinesin_motor_dom	Pfam	423	721
IPR001752	Kinesin_motor_dom	ProSiteProfiles	397	722
IPR001752	Kinesin_motor_dom	SMART	395	730
IPR001715	CH_dom	ProSiteProfiles	41	164
IPR036872	CH_dom_sf	SUPERFAMILY	41	176
IPR001752	Kinesin_motor_dom	PRINTS	470	491
IPR001752	Kinesin_motor_dom	PRINTS	672	693
IPR001752	Kinesin_motor_dom	PRINTS	592	609
IPR001752	Kinesin_motor_dom	PRINTS	623	641
IPR036872	CH_dom_sf	Gene3D	28	182
IPR001715	CH_dom	Pfam	43	163
IPR027417	P-loop_NTPase	SUPERFAMILY	397	755
IPR036961	Kinesin_motor_dom_sf	Gene3D	340	724

No CAZYmes available for this sequence

External Links

No external refs found!