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  5. Sobic.001G402300.1

Sobic.001G402300.1


Description : U2 small nuclear ribonucleoprotein B


Gene families : OG_01_0018119 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018119_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G402300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G402300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_117
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_108


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 8 220
IPR000504 RRM_dom ProSiteProfiles 159 233
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 4 112
IPR000504 RRM_dom SMART 11 85
IPR000504 RRM_dom SMART 160 229
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 148 233
IPR000504 RRM_dom Pfam 161 220
IPR000504 RRM_dom Pfam 12 82
IPR000504 RRM_dom ProSiteProfiles 10 89

No CAZYmes available for this sequence

No external refs found!