1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G409500.1

Sobic.001G409500.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006269_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G409500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G409500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_269
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_702


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 43 138
IPR001680 WD40_rpt ProSiteProfiles 351 392
IPR045151 DCAF8 PANTHER 16 477
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 296 475
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 43 382
IPR001680 WD40_rpt SMART 242 280
IPR001680 WD40_rpt SMART 87 129
IPR001680 WD40_rpt SMART 344 383
IPR001680 WD40_rpt SMART 45 84
IPR001680 WD40_rpt SMART 133 174
IPR001680 WD40_rpt SMART 180 224
IPR001680 WD40_rpt SMART 299 341
IPR001680 WD40_rpt ProSiteProfiles 52 84
IPR001680 WD40_rpt Pfam 304 340
IPR001680 WD40_rpt Pfam 349 382
IPR001680 WD40_rpt Pfam 50 84
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 139 280

No CAZYmes available for this sequence

No external refs found!