Sevir.8G086500.1

Description : Glycinamide ribonucleotide (GAR) synthetase

Gene families : OG_01_0001214 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001214_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G086500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G086500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_57

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006144	purine nucleobase metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009112	nucleobase metabolic process	None	Extended
BP	GO:0009113	purine nucleobase biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046112	nucleobase biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020562	PRibGlycinamide_synth_N	Pfam	87	188
IPR020560	PRibGlycinamide_synth_C-dom	Pfam	418	511
IPR037123	PRibGlycinamide_synth_C_sf	Gene3D	418	521
IPR020561	PRibGlycinamid_synth_ATP-grasp	Pfam	189	383
IPR020559	PRibGlycinamide_synth_CS	ProSitePatterns	377	384
IPR020560	PRibGlycinamide_synth_C-dom	SMART	417	513
IPR000115	PRibGlycinamide_synth	PANTHER	29	518
IPR000115	PRibGlycinamide_synth	TIGRFAM	87	513
IPR000115	PRibGlycinamide_synth	Hamap	86	513
IPR013815	ATP_grasp_subdomain_1	Gene3D	207	276
IPR016185	PreATP-grasp_dom_sf	SUPERFAMILY	86	189
IPR011054	Rudment_hybrid_motif	SUPERFAMILY	416	513
IPR011761	ATP-grasp	ProSiteProfiles	195	403

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.8G086500.1

Expression Profile

Co-expression Networks

Functional Annotation