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  5. Sobic.001G450000.1

Sobic.001G450000.1


Description : Nucleoporin, Nup133/Nup155-like


Gene families : OG_01_0002902 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002902_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G450000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G450000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_161


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007187 Nucleoporin_Nup133/Nup155_C Pfam 995 1120
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 80 452
IPR014908 Nucleoporin_Nup133/Nup155_N Pfam 74 519
IPR037624 Nup133-like PANTHER 28 1280

No CAZYmes available for this sequence

No external refs found!