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  5. Sobic.001G450300.1

Sobic.001G450300.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014038 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014038_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G450300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G450300.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 223 257
IPR002885 Pentatricopeptide_rpt Pfam 335 364
IPR002885 Pentatricopeptide_rpt Pfam 405 434
IPR011990 TPR-like_helical_dom_sf Gene3D 254 325
IPR011990 TPR-like_helical_dom_sf Gene3D 115 253
IPR011990 TPR-like_helical_dom_sf Gene3D 326 470
IPR002885 Pentatricopeptide_rpt TIGRFAM 198 224
IPR002885 Pentatricopeptide_rpt TIGRFAM 225 255
IPR002885 Pentatricopeptide_rpt TIGRFAM 264 297
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 332 366
IPR002885 Pentatricopeptide_rpt Pfam 219 251
IPR002885 Pentatricopeptide_rpt Pfam 258 289
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 262 296

No CAZYmes available for this sequence

No external refs found!