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  5. Sobic.001G451300.1

Sobic.001G451300.1


Description : nucleoporin 155


Gene families : OG_01_0004062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G451300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G451300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004870 Nucleoporin_Nup155 PANTHER 6 1477
IPR042538 Nucleoporin_Nup155_C_3 Gene3D 1177 1468
IPR042537 Nucleoporin_Nup155_C_2 Gene3D 1052 1154
IPR007187 Nucleoporin_Nup133/Nup155_C Pfam 867 1288
IPR014908 Nucleoporin_Nup133/Nup155_N Pfam 56 498
IPR042533 Nucleoporin_Nup155_C_1 Gene3D 890 1049

No CAZYmes available for this sequence

No external refs found!