Sobic.001G459400.3

Description : Transcriptional factor B3 family protein

Gene families : OG_01_0014212 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014212_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G459400.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G459400.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	23	129
IPR003340	B3_DNA-bd	ProSiteProfiles	29	127
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	155	253
IPR039218	REM_fam	PANTHER	27	284
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	159	250
IPR003340	B3_DNA-bd	SMART	31	127
IPR003340	B3_DNA-bd	SMART	166	256
IPR003340	B3_DNA-bd	CDD	179	252
IPR003340	B3_DNA-bd	Pfam	31	125
IPR003340	B3_DNA-bd	Pfam	175	249
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	30	133
IPR003340	B3_DNA-bd	CDD	29	125
IPR003340	B3_DNA-bd	ProSiteProfiles	164	281

No CAZYmes available for this sequence

External Links

No external refs found!