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  5. Sobic.001G459800.1

Sobic.001G459800.1


Description : UDP-glucose 6-dehydrogenase family protein


Gene families : OG_01_0002440 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002440_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G459800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G459800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_184
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_46


Type GO Term Name Evidence Source
MF GO:0003979 UDP-glucose 6-dehydrogenase activity ISM GOs from InterProScan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISM GOs from InterProScan
MF GO:0051287 NAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR028356 UDPglc_DH_euk PANTHER 1 480
IPR014027 UDP-Glc/GDP-Man_DH_C SMART 328 452
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 3 202
IPR036220 UDP-Glc/GDP-Man_DH_C_sf SUPERFAMILY 315 463
IPR014026 UDP-Glc/GDP-Man_DH_dimer Pfam 210 304
IPR028356 UDPglc_DH_euk PIRSF 1 480
IPR001732 UDP-Glc/GDP-Man_DH_N Pfam 3 186
IPR017476 UDP-Glc/GDP-Man PIRSF 2 467
IPR014027 UDP-Glc/GDP-Man_DH_C Pfam 328 451
IPR008927 6-PGluconate_DH-like_C_sf SUPERFAMILY 210 309
IPR017476 UDP-Glc/GDP-Man TIGRFAM 3 448

No CAZYmes available for this sequence

No external refs found!