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  5. Sobic.001G461300.2

Sobic.001G461300.2


Description : glutamine-rich protein 23


Gene families : OG_01_0013574 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013574_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G461300.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G461300.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 421 446
IPR002885 Pentatricopeptide_rpt TIGRFAM 170 198
IPR002885 Pentatricopeptide_rpt TIGRFAM 352 384
IPR002885 Pentatricopeptide_rpt TIGRFAM 312 344
IPR002885 Pentatricopeptide_rpt TIGRFAM 242 273
IPR002885 Pentatricopeptide_rpt TIGRFAM 461 493
IPR002885 Pentatricopeptide_rpt TIGRFAM 206 235
IPR002885 Pentatricopeptide_rpt TIGRFAM 494 526
IPR002885 Pentatricopeptide_rpt TIGRFAM 387 420
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 168 198
IPR011990 TPR-like_helical_dom_sf Gene3D 450 589
IPR011990 TPR-like_helical_dom_sf Gene3D 96 219
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 349 383
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 457 491
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 239 269
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 384 418
IPR002885 Pentatricopeptide_rpt Pfam 352 375
IPR002885 Pentatricopeptide_rpt Pfam 242 269
IPR002885 Pentatricopeptide_rpt Pfam 312 339
IPR011990 TPR-like_helical_dom_sf Gene3D 220 346
IPR011990 TPR-like_helical_dom_sf Gene3D 347 449
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 419 449
IPR002885 Pentatricopeptide_rpt Pfam 458 505
IPR002885 Pentatricopeptide_rpt Pfam 167 215
IPR002885 Pentatricopeptide_rpt Pfam 384 431
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 492 526
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 134 261
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 309 343
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 204 238

No CAZYmes available for this sequence

No external refs found!