Sobic.001G466000.1

Description : Glycosyl hydrolase family 10 protein

Gene families : OG_01_0015269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015269_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G466000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G466000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_124
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001000	GH10_dom	ProSiteProfiles	229	523
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	56	191
IPR001000	GH10_dom	Pfam	235	495
IPR044846	GH10	PANTHER	14	574
IPR003305	CenC_carb-bd	Pfam	58	176
IPR001000	GH10_dom	SMART	272	523
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	223	531

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM22	131	585	4.2e-18	59	175
GH10	303	585	1e-57	236	497

External Links

No external refs found!